PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011075323.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family GeBP
Protein Properties Length: 306aa    MW: 35171.1 Da    PI: 5.4386
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011075323.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57376.44.8e-2491183397
          DUF573   3 fqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkk.aksgkepsfskehdqkifelskkiW 96 
                     f++++seeDei+lL+Gl  f a+      + +++fy+f+k+s+  +++++q++eKirrLK Kf+++ k+ +++g   +fs +h++ +fe+sk +W
  XP_011075323.1  91 FSKIFSEEDEISLLKGLAIFWADGR---NNKWTEFYNFIKDSLPHQFTRTQVSEKIRRLKGKFENNFKRaRANGGWLDFSDAHESAVFEVSKTLW 182
                     899*****************77755...469************************************997889999******************* PP

          DUF573  97 g 97 
                     g
  XP_011075323.1 183 G 183
                     8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045042.2E-2291183IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    Send to blast
MRPQRLSFST DGEDEEDKQQ TLNEADDSDS DSESEEEECT AALPPKKPKL NLPREEEVPV  60
PRKDESECSS SSASNFIIAP AAKPSEKNTP FSKIFSEEDE ISLLKGLAIF WADGRNNKWT  120
EFYNFIKDSL PHQFTRTQVS EKIRRLKGKF ENNFKRARAN GGWLDFSDAH ESAVFEVSKT  180
LWGEDENEAG DKHAQKEKET PQRGDRSRSQ KKRKRAGKEH DAEKEIVKNQ KQVGKIGKEE  240
FASAYPLLSS SLDENGYSNI IKEKFLLIGR EKAQELEEKW RDVKAAELRL ELKRIDLIRR  300
DLHNLL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011075323.10.0PREDICTED: mediator-associated protein 1-like
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA13664413
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25210.12e-13DNA-binding storekeeper protein-related transcriptional regulator